2021

September 11, 2021
The research article “HPRep: quantifying reproducibility in HiChIP and PLAC-seq datasets” I co-authored is accepted for publication in Current Issues in Molecular Biology.

September 4, 2021
The research article “Delineating Chromatin Accessibility Re-patterning at Single Cell Level during Early Stage of Direct Cardiac Reprogramming” I co-first-authored is accepted for publication in Journal of Molecular and Cellular Cardiology.

August 17, 2021
The research article “ExpressHeart: Web Portal to Visualize Transcriptome Profiles of Non-cardiomyocyte Cells” I co-corresponding-authored is accepted for publication in International Journal of Molecular Sciences.

August 13, 2021
The research article “Coordinated transcriptome and cell state dynamics of non-myocytes in heart regeneration” I co-first-authored is accepted for publication in EMBO reports.

June 17, 2021
The research article “SnapHiC: a computational pipeline to identify chromatin loops from single cell Hi-C data” I co-authored is accepted for publication in Nature Methods.

June 15, 2021
The research article “Dimensionality reduction by UMAP reinforces sample heterogeneity analysis in bulk transcriptomic data” I co-authored is accepted for publication in principle in Cell Reports.

May 11, 2021

The research article “MUNIn—multiple-sample-unifying long-range chromatin Interaction detector: a statistical framework for identifying long-range chromatin interactions from multiple samples” I co-corresponding-authored is accepted for publication in Human Genetics and Genomics.

April 9, 2021

The research article “Development of Next-generation Tumor-homing Induced Neural Stem Cells to Enhance Treatment of Metastatic Cancers” I co-authored is accepted for publication in Science Advances.

April 5, 2021

The research article “Single cell dual-omics reveals the transcriptomic and epigenomic diversity of cardiac non-myocytes” I co-first-authored is accepted for publication in Cardiovascular Research.

March 22, 2021

The research article “Super-hotspots and -coldspots in the repair of UV-induced DNA damage in the human genome” I co-authored is accepted for publication in Journal of Biological Chemistry.

March 15, 2021

The research article “iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement” I first authored is accepted for publication in Briefings in Bioinformatics.

February 22, 2021

The research article “Mucosal Associated Invariant T (MAIT) Cell Responses Differ by Sex in COVID-19” I co-authored is accepted for publication in Med.

January 15, 2021

The review article “Direct cell reprogramming: approaches, mechanisms and progress” I co-authored is accepted for publication in Nature Reviews Molecular Cell Biology.

January 5, 2021

The research article “HiC-ACT: Improved Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test” I co-corresponding-authored is accepted in principle for publication in American Journal of Human Genetics.

2020

December 20, 2020

The research article “FIREcaller: Detecting Frequently Interacting Regions from Hi-C Data” I co-corresponding-authored is accepted for publication in Computational and Structural Biotechnology Journal.

October 26, 2020

The research article “Assessment of Familial Risk in Patients with Hidradenitis Suppurativa” I co-authored is provisionally accepted for publication in British Journal of Dermatology.

October 20, 2020

The research article “Unravelling the molecular mechanisms of Abscisic acid-mediated drought-stress alleviation in pomegranate (Punica granatum L.)” I co-corresponding-authored is accepted for publication in Plant Physiology and Biochemistry.

September 16, 2020

The research article “Downregulation of Beclin1 promotes direct cardiac reprogramming” I co-authored is accepted for publication in Science Translational Medicine.

May 1, 2020

The research article “SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection” I co-first authored is accepted for publication in Briefings in Bioinformatics.

I offically become an Research Assistant Professor in Department of Pathology and Laboratory Medicine and McAllister Heart Institute, University of North Carolina, Chapel Hill.